Study on PM2.5-Activated PDK4-Glycolytic Pathway Driving Histone Lactylation to Exacerbate Renal Tubular Injury

 

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https://storage.unitedwebnetwork.com/files/1099/307ca84735f613953bf4e7ebb7f969e5.pdf
Study on PM2.5-Activated PDK4-Glycolytic Pathway Driving Histone Lactylation to Exacerbate Renal Tubular Injury

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Bin
Yi
Zishun Zhan 876323763@qq.com The Third Xiangya Hospital,Central South University Department of Nephrology Changsha China -
Zhijun Huang huangzj@csu.edu.cn The Third Xiangya Hospital,Central South University Department of Nephrology Changsha China -
Bin Yi yibin2008@csu.edu.cn The Third Xiangya Hospital,Central South University Department of Nephrology Changsha China *
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The global burden of chronic kidney disease (CKD) continues to escalate. Fine particulate matter (PM2.5)has been identified as a significant risk factor for CKD onset, progression, and mortality. However, the underlying mechanisms remain unclear. We have demonstrated that PM2.5 exposure leads to its deposition in renal proximal tubular cells (PTCs) of mice, causing structural damage and functional impairment. We find that pyruvate dehydrogenase kinase 4(PDK4)-mediated energy metabolism dysfunction and epigenetic modifications in PTCs may play a crucial role.

Previous studies by our research group utilizing RNA-seq, phosphoproteomic analysis, and single-cell sequencing have revealed that PDK4 is specifically upregulated in mice PTC cells. This upregulation inhibits the activity of its downstream substrate PDHA1(pS232), thereby stalling the mitochondrial tricarboxylic acid (TCA) cycle and resulting in cellular metabolic impairment. This project utilizes Pdk4 knockout mice, overexpression/ knockout HK-2 cell lines, and techniques like ChIP-seq,metabolic flux analysis, metabolomic mass spectrometry, and in vivo adeno-associated virus intervention to comprehensively analyze the coupling mechanisms of PDK4-regulated metabolic switching and Lactylation.

PM2.5 exposure reprograms mice PTC metabolism. KEGG/GO and GSEA showed predominant metabolic pathway involvement, with suppression of fatty acid β-oxidation, activation of glycolysis, and minimal impact on amino acid metabolism. Metabolite profiling confirmed glucose–lipid dysregulation and a glycolytic shift. Mechanistically, PM2.5 induced PDK4 upregulation and PDHA1 (Ser232) phosphorylation, indicating PDHc inhibition. Pharmacologic PDK4 blockade or genetic deletion relieved TCA cycle impairment, curtailed excessive glycolysis, restored oxidative respiration , and reduced lactate accumulation, apoptosis, and oxidative stress—identifying PDK4 as a key metabolic node. Elevated lactate coincided with increased protein lactylation, specifically histone H4K12 lactylation enriched at transcription start sites. Integrative RNA-seq/ChIP-seq analysis linked H4K12la to upregulation of key glycolytic (PFKP, LDHA) genes.

This study identifies a PDK4–lactate–H4K12la metabolic/epigenetic axis whereby PM2.5-triggered mitochondrial dysfunction drives lactate accumulation, site-specific H4K12 lactylation, and transcriptional upregulation of glycolytic pathways; these insights nominate PDK4 and lactylation dynamics as therapeutic entry points for PM2.5-related kidney injury.

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