UNCOVERING REGIONAL MOLECULAR ALTERATIONS IN BENI-KOJI-RELATED KIDNEY INJURY USING VISIUM HD TECHNOLOGY

 

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https://storage.unitedwebnetwork.com/files/1099/481394bcc2213d62ba48ce0ce36a9928.pdf
UNCOVERING REGIONAL MOLECULAR ALTERATIONS IN BENI-KOJI-RELATED KIDNEY INJURY USING VISIUM HD TECHNOLOGY

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Sari
Iwasaki
Sari Iwasaki sariwasaki@gmail.com Hokkaido University Pathology Sapporo Japan *
Takako Yamaguchi yamaguchi1131@gmail.com Sapporo City General Hospital Pathology Sapporo Japan -
Shugo Tanaka blackcow.in.aja@gmail.com Hokkaido University Pathology Sapporo Japan -
Yuko Katayama ykatayama.hok@gmail.com Hokkaido University Pathology Sapporo Japan -
Satoshi Aoyama satoshiaoyama3104@gmail.com Hokkaido University Pathology Sapporo Japan -
Takahiro Tsuji tsuji.takahiro@gmail.com Sapporo City General Hospital Pathology Sapporo Japan -
Satoshi Tanaka binntanaka@med.hokudai.ac.jp Hokkaido University Pathology Sapporo Japan -
Koji Taniguchi kotaniguchi@med.hokudai.ac.jp Hokkaido University Pathology Sapporo Japan -
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Beni-Koji, a red mold rice supplement, has recently been implicated in acute kidney injury cases in Japan. Although the clinical and laboratory features of Beni-Koji-associated nephropathy have been increasingly characterized, the molecular and cellular mechanisms underlying renal injury remain poorly understood.

We performed spatial transcriptomic analysis using Visium HD on renal biopsy tissues from Japanese patients diagnosed with Beni-Koji supplement-induced kidney injury. Formalin-fixed, paraffin-embedded (FFPE) samples from confirmed cases were processed for high-resolution transcriptomic profiling. Data were analyzed with Seurat for clustering, cell type annotation, and identification of differentially expressed genes (DEGs) among injured and control regions.

Spatial transcriptomics revealed pronounced alterations in proximal tubular cells, including upregulation of stress response and apoptotic pathways (e.g., CASP3, JUN, DUSP1). Myofibroblast activation and endothelial cell injury signatures were detected in affected areas. Pathway enrichment analysis identified involvement of AP-1 signaling and complement activation in the pathogenesis. Injury-related Gene Ontology terms such as “response to oxidative stress” and “blood vessel development” were significantly enriched. Despite supplement cessation, most patients retained reduced eGFR, correlating with persistent tubular injury signatures.

This study provides the first spatial molecular map of Beni-Koji-associated human renal injury and underscores the utility of Visium HD-based transcriptomics for characterizing cellular heterogeneity and pathogenic mechanisms. Results highlight novel therapeutic targets and inform clinical management strategies for supplement-induced nephropathy.

Kewords