CFHR GENE ALTERATIONS DEFINE A COMPLEMENT-DRIVEN SUBTYPE OF IGA NEPHROPATHY WITH DISTINCT PATHOLOGY AND POOR RENAL OUTCOMES

 

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CFHR GENE ALTERATIONS DEFINE A COMPLEMENT-DRIVEN SUBTYPE OF IGA NEPHROPATHY WITH DISTINCT PATHOLOGY AND POOR RENAL OUTCOMES

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PRANJAL
KASHIV
PRANJAL KASHIV pranjalkashiv88@gmail.com ALL INDIA INSTITUE OF MEDICAL SCIENCES, NAGPUR NEPHROLOGY NAGPUR India *
MANISH BALWANI balwani.manish@yahoo.com SARASWATI KIDNEY CARE CENTRE, NAGPUR NEPHROLOGY NAGPUR India -
AMIT PASARI dramit28@yahoo.co.in SARASWATI KIDNEY CARE CENTRE, NAGPUR NEPHROLOGY NAGPUR India -
VIVEK KUTE drvivekkute@rediffmail.com INSTITUTE OF KIDNEY DISEASE AND RESEARCH CENTRE, AHMEDABAD NEPHROLOGY AHMEDABAD India -
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Aberrant activation of the alternative complement pathway is increasingly recognised as a central driver of IgA nephropathy (IgAN). While most prior work has focused on circulating complement components or factor H–related (FHR) protein levels, the clinical significance of CFHR gene variants remains insufficiently defined. Characterising their phenotypic and pathological correlates could unravel disease heterogeneity, refine risk stratification, and inform the design of precision complement-targeted interventions.

We retrospectively analysed 142 patients evaluated for complement-mediated kidney disease at a tertiary nephrology centre in India between January 2021 and April 2025. All underwent CFHR gene copy-number and sequence analysis using multiplex ligation-dependent probe amplification and/or targeted next-generation sequencing. Among these, 23 biopsy-proven IgAN cases were systematically examined for genotype–phenotype correlations, complement biomarker signatures, histopathological severity, and renal outcomes. Clinical and pathological variables were compared between patients with and without CFHR alterations.

Pathogenic or likely pathogenic CFHR variants were identified in 48% (11/23) of IgAN cases, most commonly CFHR1/3 deletions (n = 6) and CFHR5 variants (n = 3). Patients carrying CFHR variants exhibited a markedly higher prevalence of thrombotic microangiopathy-like injury (44% vs. 11%, p = 0.018), increased crescent formation (39% vs. 13%, p = 0.032), and a greater requirement for kidney replacement therapy during follow-up (36% vs. 9%, p = 0.041). Complement abnormalities — including reduced serum C3 and anti-factor H antibody positivity — were significantly enriched among mutation carriers. Kaplan–Meier survival analysis demonstrated inferior kidney survival in the mutation-positive cohort (log-rank p = 0.008).

CFHR gene alterations define a clinically and histologically distinct subtype of IgAN characterised by excessive complement activation, microangiopathic injury, and accelerated progression to kidney failure. Incorporating CFHR genetic screening into diagnostic workflows could enable early identification of high-risk patients and guide precision therapy. These findings also establish a biological rationale for stratifying patients in future clinical trials of complement inhibitors, potentially transforming the therapeutic landscape of IgAN.

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